IL_4V9M_235

3D structure

PDB id

4V9M (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S Ribosome translocation intermediate FA-4.2A containing elongation factor EFG/FUSIDIC ACID/GDP, mRNA, and tRNA bound in the pe*/E state.

Experimental method

X-RAY DIFFRACTION

Resolution

4 Å

Loop

Sequence

CUACAAAG*CAAAAAGG

Length

16 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V9M|1|CA|C|1246
4V9M|1|CA|U|1247
4V9M|1|CA|A|1248
4V9M|1|CA|C|1249
4V9M|1|CA|A|1250
4V9M|1|CA|A|1251
4V9M|1|CA|A|1252
4V9M|1|CA|G|1253
*
4V9M|1|CA|C|1284
4V9M|1|CA|A|1285
4V9M|1|CA|A|1286
4V9M|1|CA|A|1287
4V9M|1|CA|A|1288
4V9M|1|CA|A|1289
4V9M|1|CA|G|1290
4V9M|1|CA|G|1291

Current chains

Chain CA

ribosomal RNA 16S

Nearby chains

Chain CG

30S ribosomal protein S7

Chain CI

30S ribosomal protein S9

Chain CJ

30S ribosomal protein S10

Chain CN

30S ribosomal protein S14 type Z