3D structure

PDB id
4V9N (explore in PDB, NAKB, or RNA 3D Hub)
Description
Crystal structure of the 70S ribosome bound with the Q253P mutant of release factor RF2.
Experimental method
X-RAY DIFFRACTION
Resolution
3.4 Å

Loop

Sequence
CGUG*CG
Length
6 nucleotides
Bulged bases
4V9N|1|AA|G|64, 4V9N|1|AA|U|65
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_4V9N_005 not in the Motif Atlas
Homologous match to IL_6CZR_117
Geometric discrepancy: 0.1564
The information below is about IL_6CZR_117
Detailed Annotation
Multiple bulged bases
Broad Annotation
No text annotation
Motif group
IL_82107.3
Basepair signature
cWW-cWW
Number of instances in this motif group
30

Unit IDs

4V9N|1|AA|C|63
4V9N|1|AA|G|64
4V9N|1|AA|U|65
4V9N|1|AA|G|66
*
4V9N|1|AA|C|103
4V9N|1|AA|G|104

Current chains

Chain AA
16S rRNA (1504-MER)

Nearby chains

Chain AT
30S ribosomal protein S20

Coloring options:


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