IL_4V9N_192

3D structure

PDB id

4V9N (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the 70S ribosome bound with the Q253P mutant of release factor RF2.

Experimental method

X-RAY DIFFRACTION

Resolution

3.4 Å

Loop

Sequence

GG*UGGCC

Length

7 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4V9N_192 not in the Motif Atlas

Homologous match to IL_4LFB_013

Geometric discrepancy: 0.1149

The information below is about IL_4LFB_013

Detailed Annotation

C-loop

Broad Annotation

No text annotation

Motif group

IL_03109.3

Basepair signature

cWW-cWS-tWH-cWW-L

Number of instances in this motif group

6

Unit IDs

4V9N|1|CA|G|292
4V9N|1|CA|G|293
*
4V9N|1|CA|U|304
4V9N|1|CA|G|305
4V9N|1|CA|G|306
4V9N|1|CA|C|307
4V9N|1|CA|C|308

Current chains

Chain CA

16S rRNA (1504-MER)

Nearby chains

Chain CL

30S ribosomal protein S12

Chain CP

30S ribosomal protein S16