IL_4V9N_224
3D structure
- PDB id
- 4V9N (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the 70S ribosome bound with the Q253P mutant of release factor RF2.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.4 Å
Loop
- Sequence
- CG*CUG
- Length
- 5 nucleotides
- Bulged bases
- 4V9N|1|CA|U|1196
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4V9N_224 not in the Motif Atlas
- Homologous match to IL_4LFB_046
- Geometric discrepancy: 0.2417
- The information below is about IL_4LFB_046
- Detailed Annotation
- Single bulged U
- Broad Annotation
- No text annotation
- Motif group
- IL_89505.4
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 117
Unit IDs
4V9N|1|CA|C|1060
4V9N|1|CA|G|1061
*
4V9N|1|CA|C|1195
4V9N|1|CA|U|1196
4V9N|1|CA|G|1197
Current chains
- Chain CA
- 16S rRNA (1504-MER)
Nearby chains
- Chain CC
- 30S ribosomal protein S3
- Chain CE
- 30S ribosomal protein S5
- Chain CI
- 30S ribosomal protein S9
- Chain CJ
- 30S ribosomal protein S10
- Chain CN
- 30S ribosomal protein S14
- Chain CV
- messenger RNA (5'-R(*AP*AP*UP*GP*UP*AP*G)-3')
- Chain CY
- Bacterial peptide chain release factor 2 (RF-2)
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