IL_4V9N_233
3D structure
- PDB id
- 4V9N (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the 70S ribosome bound with the Q253P mutant of release factor RF2.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.4 Å
Loop
- Sequence
- GUC*GUC
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4V9N_233 not in the Motif Atlas
- Geometric match to IL_4V88_465
- Geometric discrepancy: 0.1587
- The information below is about IL_4V88_465
- Detailed Annotation
- Isolated non-canonical cWW pair
- Broad Annotation
- No text annotation
- Motif group
- IL_44258.2
- Basepair signature
- cWW-cWW-cWW
- Number of instances in this motif group
- 301
Unit IDs
4V9N|1|CA|G|1405
4V9N|1|CA|U|1406
4V9N|1|CA|C|1407
*
4V9N|1|CA|G|1494
4V9N|1|CA|U|1495
4V9N|1|CA|C|1496
Current chains
- Chain CA
- 16S rRNA (1504-MER)
Nearby chains
- Chain CV
- messenger RNA (5'-R(*AP*AP*UP*GP*UP*AP*G)-3')
- Chain CW
- Transfer RNA; tRNA
- Chain CY
- Bacterial peptide chain release factor 2 (RF-2)
- Chain DA
- Large subunit ribosomal RNA; LSU rRNA
Coloring options: