IL_4V9N_380

3D structure

PDB id

4V9N (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the 70S ribosome bound with the Q253P mutant of release factor RF2.

Experimental method

X-RAY DIFFRACTION

Resolution

3.4 Å

Loop

Sequence

UUAGUUGCCAGCG*CGGGCACUCUAA

Length

25 nucleotides

Bulged bases

4V9N|1|CA|U|1125, 4V9N|1|CA|C|1129

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V9N|1|CA|U|1121
4V9N|1|CA|U|1122
4V9N|1|CA|A|1123
4V9N|1|CA|G|1124
4V9N|1|CA|U|1125
4V9N|1|CA|U|1126
4V9N|1|CA|G|1127
4V9N|1|CA|C|1128
4V9N|1|CA|C|1129
4V9N|1|CA|A|1130
4V9N|1|CA|G|1131
4V9N|1|CA|C|1132
4V9N|1|CA|G|1133
*
4V9N|1|CA|C|1141
4V9N|1|CA|G|1142
4V9N|1|CA|G|1143
4V9N|1|CA|G|1144
4V9N|1|CA|C|1145
4V9N|1|CA|A|1146
4V9N|1|CA|C|1147
4V9N|1|CA|U|1148
4V9N|1|CA|C|1149
4V9N|1|CA|U|1150
4V9N|1|CA|A|1151
4V9N|1|CA|A|1152

Current chains

Chain CA

16S rRNA (1504-MER)

Nearby chains

Chain CI

30S ribosomal protein S9

Chain CJ

30S ribosomal protein S10

Chain CN

30S ribosomal protein S14