IL_4V9N_386

3D structure

PDB id

4V9N (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the 70S ribosome bound with the Q253P mutant of release factor RF2.

Experimental method

X-RAY DIFFRACTION

Resolution

3.4 Å

Loop

Sequence

GGAGG*CCUUUAAAGAGUGCGUAAUAGCUCAC

Length

31 nucleotides

Bulged bases

4V9N|1|DA|A|1088

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V9N|1|DA|G|1055
4V9N|1|DA|G|1056
4V9N|1|DA|A|1057
4V9N|1|DA|G|1058
4V9N|1|DA|G|1059
*
4V9N|1|DA|C|1079
4V9N|1|DA|C|1080
4V9N|1|DA|U|1081
4V9N|1|DA|U|1082
4V9N|1|DA|U|1083
4V9N|1|DA|A|1084
4V9N|1|DA|A|1085
4V9N|1|DA|A|1086
4V9N|1|DA|G|1087
4V9N|1|DA|A|1088
4V9N|1|DA|G|1089
4V9N|1|DA|U|1090
4V9N|1|DA|G|1091
4V9N|1|DA|C|1092
4V9N|1|DA|G|1093
4V9N|1|DA|U|1094
4V9N|1|DA|A|1095
4V9N|1|DA|A|1096
4V9N|1|DA|U|1097
4V9N|1|DA|A|1098
4V9N|1|DA|G|1099
4V9N|1|DA|C|1100
4V9N|1|DA|U|1101
4V9N|1|DA|C|1102
4V9N|1|DA|A|1103
4V9N|1|DA|C|1104

Current chains

Chain DA

23S ribosomal RNA

Nearby chains

Chain CY

Bacterial peptide chain release factor 2 (RF-2)

Chain DK

50S ribosomal protein L11