IL_4V9O_011

3D structure

PDB id

4V9O (explore in PDB, NAKB, or RNA 3D Hub)

Description

Control of ribosomal subunit rotation by elongation factor G

Experimental method

X-RAY DIFFRACTION

Resolution

2.9 Å

Loop

Sequence

CCUGAAUC*GUGAG

Length

13 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4V9O_011 not in the Motif Atlas

Homologous match to IL_5J7L_253

Geometric discrepancy: 0.2355

The information below is about IL_5J7L_253

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_77870.1

Basepair signature

cWW-L-R-L-tHS-L-cWW-L-cWW

Number of instances in this motif group

2

Unit IDs

4V9O|1|AA|C|274
4V9O|1|AA|C|275
4V9O|1|AA|U|276
4V9O|1|AA|G|277
4V9O|1|AA|A|278
4V9O|1|AA|A|279
4V9O|1|AA|U|280
4V9O|1|AA|C|281
*
4V9O|1|AA|G|359
4V9O|1|AA|U|360
4V9O|1|AA|G|361
4V9O|1|AA|A|362
4V9O|1|AA|G|363

Current chains

Chain AA

23S rRNA

Nearby chains