IL_4V9O_071

3D structure

PDB id

4V9O (explore in PDB, NAKB, or RNA 3D Hub)

Description

Control of ribosomal subunit rotation by elongation factor G

Experimental method

X-RAY DIFFRACTION

Resolution

2.9 Å

Loop

Sequence

UCC*GGA

Length

6 nucleotides

Bulged bases

None detected

QA status

Self-complementary: UCC,GGA

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4V9O_071 not in the Motif Atlas

Geometric match to IL_4E5C_001

Geometric discrepancy: 0.1677

The information below is about IL_4E5C_001

Detailed Annotation

Isolated cWH basepair

Broad Annotation

No text annotation

Motif group

IL_10167.6

Basepair signature

cWW-cHW-cWW

Number of instances in this motif group

51

Unit IDs

4V9O|1|AA|U|1725
4V9O|1|AA|C|1726
4V9O|1|AA|C|1727
*
4V9O|1|AA|G|1733
4V9O|1|AA|G|1734
4V9O|1|AA|A|1735

Current chains

Chain AA

23S rRNA

Nearby chains