IL_4V9O_175
3D structure
- PDB id
- 4V9O (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Control of ribosomal subunit rotation by elongation factor G
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.9 Å
Loop
- Sequence
- GUC*GAC
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Self-complementary: GUC,GAC
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4V9O_175 not in the Motif Atlas
- Geometric match to IL_4V9F_105
- Geometric discrepancy: 0.173
- The information below is about IL_4V9F_105
- Detailed Annotation
- Isolated non-canonical cWW pair
- Broad Annotation
- No text annotation
- Motif group
- IL_01003.2
- Basepair signature
- cWW-cWW-cWW
- Number of instances in this motif group
- 213
Unit IDs
4V9O|1|BA|G|1312
4V9O|1|BA|U|1313
4V9O|1|BA|C|1314
*
4V9O|1|BA|G|1323
4V9O|1|BA|A|1324
4V9O|1|BA|C|1325
Current chains
- Chain BA
- 16S rRNA
Nearby chains
- Chain BM
- 30S ribosomal protein S13
- Chain BN
- 30S ribosomal protein S14
- Chain BS
- 30S ribosomal protein S19
Coloring options: