IL_4V9O_374

3D structure

PDB id

4V9O (explore in PDB, NAKB, or RNA 3D Hub)

Description

Control of ribosomal subunit rotation by elongation factor G

Experimental method

X-RAY DIFFRACTION

Resolution

2.9 Å

Loop

Sequence

CAG*CGAUG

Length

8 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4V9O_374 not in the Motif Atlas

Homologous match to IL_5J7L_252

Geometric discrepancy: 0.1125

The information below is about IL_5J7L_252

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_47972.1

Basepair signature

cWW-L-R-L-cWW-L

Number of instances in this motif group

1

Unit IDs

4V9O|1|EA|C|269
4V9O|1|EA|A|270
4V9O|1|EA|G|271
*
4V9O|1|EA|C|366
4V9O|1|EA|G|367
4V9O|1|EA|A|368
4V9O|1|EA|U|369
4V9O|1|EA|G|370

Current chains

Chain EA

23S rRNA

Nearby chains