IL_4V9O_493

3D structure

PDB id

4V9O (explore in PDB, NAKB, or RNA 3D Hub)

Description

Control of ribosomal subunit rotation by elongation factor G

Experimental method

X-RAY DIFFRACTION

Resolution

2.9 Å

Loop

Sequence

CUG*CGG

Length

6 nucleotides

Bulged bases

None detected

QA status

Self-complementary:

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4V9O_493 not in the Motif Atlas

Geometric match to IL_4TS2_003

Geometric discrepancy: 0.2629

The information below is about IL_4TS2_003

Detailed Annotation

Isolated cWS basepair

Broad Annotation

No text annotation

Motif group

IL_52767.5

Basepair signature

cWW-L-R-cWW

Number of instances in this motif group

28

Unit IDs

4V9O|1|FA|C|156
4V9O|1|FA|U|157
4V9O|1|FA|G|158
*
4V9O|1|FA|C|163
4V9O|1|FA|G|164
4V9O|1|FA|G|165

Current chains

Chain FA

16S rRNA

Nearby chains

Chain FT

30S ribosomal protein S20