IL_4V9O_546
3D structure
- PDB id
- 4V9O (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Control of ribosomal subunit rotation by elongation factor G
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.9 Å
Loop
- Sequence
- GUGGAUG*CUGAAAC
- Length
- 14 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4V9O_546 not in the Motif Atlas
- Homologous match to IL_4WF9_001
- Geometric discrepancy: 0.0912
- The information below is about IL_4WF9_001
- Detailed Annotation
- Triple sheared with non-canonical cWW
- Broad Annotation
- Triple sheared
- Motif group
- IL_22311.1
- Basepair signature
- cWW-cWW-tSH-tHS-tHS-L-R-cWW
- Number of instances in this motif group
- 10
Unit IDs
4V9O|1|GA|G|24
4V9O|1|GA|U|25
4V9O|1|GA|G|26
4V9O|1|GA|G|27
4V9O|1|GA|A|28
4V9O|1|GA|U|29
4V9O|1|GA|G|30
*
4V9O|1|GA|C|510
4V9O|1|GA|U|511
4V9O|1|GA|G|512
4V9O|1|GA|A|513
4V9O|1|GA|A|514
4V9O|1|GA|A|515
4V9O|1|GA|C|516
Current chains
- Chain GA
- 23S rRNA
Nearby chains
- Chain G0
- 50S ribosomal protein L32
- Chain GQ
- 50S ribosomal protein L20
- Chain GS
- 50S ribosomal protein L22
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