IL_4V9O_582
3D structure
- PDB id
- 4V9O (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Control of ribosomal subunit rotation by elongation factor G
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.9 Å
Loop
- Sequence
- GCCA*UGC
- Length
- 7 nucleotides
- Bulged bases
- 4V9O|1|GA|C|995
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4V9O_582 not in the Motif Atlas
- Geometric match to IL_1U6B_001
- Geometric discrepancy: 0.2733
- The information below is about IL_1U6B_001
- Detailed Annotation
- Isolated non-canonical cWW pair
- Broad Annotation
- Isolated non-canonical cWW pair
- Motif group
- IL_57744.1
- Basepair signature
- cWW-cWW-cWW
- Number of instances in this motif group
- 22
Unit IDs
4V9O|1|GA|G|993
4V9O|1|GA|C|994
4V9O|1|GA|C|995
4V9O|1|GA|A|996
*
4V9O|1|GA|U|1159
4V9O|1|GA|G|1160
4V9O|1|GA|C|1161
Current chains
- Chain GA
- 23S rRNA
Nearby chains
- Chain GJ
- 50S ribosomal protein L13
- Chain GQ
- 50S ribosomal protein L20
- Chain GR
- 50S ribosomal protein L21
- Chain GZ
- 50S ribosomal protein L30
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