IL_4V9O_636

3D structure

PDB id

4V9O (explore in PDB, NAKB, or RNA 3D Hub)

Description

Control of ribosomal subunit rotation by elongation factor G

Experimental method

X-RAY DIFFRACTION

Resolution

2.9 Å

Loop

Sequence

AGC*GUU

Length

6 nucleotides

Bulged bases

None detected

QA status

Self-complementary:

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4V9O_636 not in the Motif Atlas

Geometric match to IL_4P3U_006

Geometric discrepancy: 0.257

The information below is about IL_4P3U_006

Detailed Annotation

Isolated non-canonical cWW pair

Broad Annotation

No text annotation

Motif group

IL_28037.2

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

65

Unit IDs

4V9O|1|GA|A|2101
4V9O|1|GA|G|2102
4V9O|1|GA|C|2103
*
4V9O|1|GA|G|2186
4V9O|1|GA|U|2187
4V9O|1|GA|U|2188

Current chains

Chain GA

23S rRNA

Nearby chains

Chain GH

50S ribosomal protein L9