IL_4V9O_683

3D structure

PDB id

4V9O (explore in PDB, NAKB, or RNA 3D Hub)

Description

Control of ribosomal subunit rotation by elongation factor G

Experimental method

X-RAY DIFFRACTION

Resolution

2.9 Å

Loop

Sequence

UAGUA*UAG

Length

8 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4V9O_683 not in the Motif Atlas

Homologous match to IL_6CZR_124

Geometric discrepancy: 0.266

The information below is about IL_6CZR_124

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_38684.1

Basepair signature

cWW-L-cWW-cWW

Number of instances in this motif group

2

Unit IDs

4V9O|1|HA|U|249
4V9O|1|HA|A|250
4V9O|1|HA|G|251
4V9O|1|HA|U|252
4V9O|1|HA|A|253
*
4V9O|1|HA|U|273
4V9O|1|HA|A|274
4V9O|1|HA|G|275

Current chains

Chain HA

16S rRNA

Nearby chains

Chain HQ

30S ribosomal protein S17