IL_4V9O_754

3D structure

PDB id

4V9O (explore in PDB, NAKB, or RNA 3D Hub)

Description

Control of ribosomal subunit rotation by elongation factor G

Experimental method

X-RAY DIFFRACTION

Resolution

2.9 Å

Loop

Sequence

AAUUC*GUUAU

Length

10 nucleotides

Bulged bases

4V9O|1|CA|U|846, 4V9O|1|CA|U|931

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4V9O_754 not in the Motif Atlas

Homologous match to IL_5J7L_399

Geometric discrepancy: 0.1706

The information below is about IL_5J7L_399

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_96236.1

Basepair signature

cWW-tWW-cWW-L-cWW

Number of instances in this motif group

1

Unit IDs

4V9O|1|CA|A|844
4V9O|1|CA|A|845
4V9O|1|CA|U|846
4V9O|1|CA|U|847
4V9O|1|CA|C|848
*
4V9O|1|CA|G|930
4V9O|1|CA|U|931
4V9O|1|CA|U|932
4V9O|1|CA|A|933
4V9O|1|CA|U|934

Current chains

Chain CA

23S rRNA

Nearby chains

Chain CZ

50S ribosomal protein L30