3D structure

PDB id
4V9O (explore in PDB, NAKB, or RNA 3D Hub)
Description
Control of ribosomal subunit rotation by elongation factor G
Experimental method
X-RAY DIFFRACTION
Resolution
2.9 Å

Loop

Sequence
CGGGGGUAG*CGAAUACCG
Length
18 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

4V9O|1|GA|C|854
4V9O|1|GA|G|855
4V9O|1|GA|G|856
4V9O|1|GA|G|857
4V9O|1|GA|G|858
4V9O|1|GA|G|859
4V9O|1|GA|U|860
4V9O|1|GA|A|861
4V9O|1|GA|G|862
*
4V9O|1|GA|C|915
4V9O|1|GA|G|916
4V9O|1|GA|A|917
4V9O|1|GA|A|918
4V9O|1|GA|U|919
4V9O|1|GA|A|920
4V9O|1|GA|C|921
4V9O|1|GA|C|922
4V9O|1|GA|G|923

Current chains

Chain GA
23S rRNA

Nearby chains

Chain GB
5S ribosomal RNA; 5S rRNA
Chain GM
50S ribosomal protein L16
Chain GV
50S ribosomal protein L25
Chain GW
50S ribosomal protein L27
Chain GZ
50S ribosomal protein L30

Coloring options:

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