IL_4V9P_048

3D structure

PDB id

4V9P (explore in PDB, NAKB, or RNA 3D Hub)

Description

Control of ribosomal subunit rotation by elongation factor G

Experimental method

X-RAY DIFFRACTION

Resolution

2.9 Å

Loop

Sequence

GUAAG*UAUC

Length

9 nucleotides

Bulged bases

4V9P|1|AA|A|1205

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4V9P_048 not in the Motif Atlas

Homologous match to IL_5J7L_287

Geometric discrepancy: 0.065

The information below is about IL_5J7L_287

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_91920.1

Basepair signature

cWW-cWW-tHH-cWW

Number of instances in this motif group

1

Unit IDs

4V9P|1|AA|G|1202
4V9P|1|AA|U|1203
4V9P|1|AA|A|1204
4V9P|1|AA|A|1205
4V9P|1|AA|G|1206
*
4V9P|1|AA|U|1240
4V9P|1|AA|A|1241
4V9P|1|AA|U|1242
4V9P|1|AA|C|1243

Current chains

Chain AA

23S rRNA

Nearby chains

Chain AE

50S ribosomal protein L4

Chain AL

50S ribosomal protein L15