IL_4V9P_112

3D structure

PDB id

4V9P (explore in PDB, NAKB, or RNA 3D Hub)

Description

Control of ribosomal subunit rotation by elongation factor G

Experimental method

X-RAY DIFFRACTION

Resolution

2.9 Å

Loop

Sequence

UGUAAG*UUGAG

Length

11 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4V9P_112 not in the Motif Atlas

Homologous match to IL_5J7L_354

Geometric discrepancy: 0.0779

The information below is about IL_5J7L_354

Detailed Annotation

tHS double platform

Broad Annotation

No text annotation

Motif group

IL_70411.2

Basepair signature

cWW-tSH-L-tHH-L-cWW

Number of instances in this motif group

7

Unit IDs

4V9P|1|AA|U|2847
4V9P|1|AA|G|2848
4V9P|1|AA|U|2849
4V9P|1|AA|A|2850
4V9P|1|AA|A|2851
4V9P|1|AA|G|2852
*
4V9P|1|AA|U|2865
4V9P|1|AA|U|2866
4V9P|1|AA|G|2867
4V9P|1|AA|A|2868
4V9P|1|AA|G|2869

Current chains

Chain AA

23S rRNA

Nearby chains

Chain AN

50S ribosomal protein L17

Chain AP

50S ribosomal protein L19