IL_4V9P_195

3D structure

PDB id

4V9P (explore in PDB, NAKB, or RNA 3D Hub)

Description

Control of ribosomal subunit rotation by elongation factor G

Experimental method

X-RAY DIFFRACTION

Resolution

2.9 Å

Loop

Sequence

CCUGAAUC*GUGAG

Length

13 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4V9P_195 not in the Motif Atlas

Homologous match to IL_5J7L_253

Geometric discrepancy: 0.2525

The information below is about IL_5J7L_253

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_77870.1

Basepair signature

cWW-L-R-L-tHS-L-cWW-L-cWW

Number of instances in this motif group

2

Unit IDs

4V9P|1|CA|C|274
4V9P|1|CA|C|275
4V9P|1|CA|U|276
4V9P|1|CA|G|277
4V9P|1|CA|A|278
4V9P|1|CA|A|279
4V9P|1|CA|U|280
4V9P|1|CA|C|281
*
4V9P|1|CA|G|359
4V9P|1|CA|U|360
4V9P|1|CA|G|361
4V9P|1|CA|A|362
4V9P|1|CA|G|363

Current chains

Chain CA

23S rRNA

Nearby chains