IL_4V9P_303

3D structure

PDB id

4V9P (explore in PDB, NAKB, or RNA 3D Hub)

Description

Control of ribosomal subunit rotation by elongation factor G

Experimental method

X-RAY DIFFRACTION

Resolution

2.9 Å

Loop

Sequence

CGAA*UG

Length

6 nucleotides

Bulged bases

4V9P|1|DA|G|64, 4V9P|1|DA|A|65

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4V9P_303 not in the Motif Atlas

Homologous match to IL_5J7L_005

Geometric discrepancy: 0.092

The information below is about IL_5J7L_005

Detailed Annotation

Multiple bulged bases

Broad Annotation

No text annotation

Motif group

IL_82107.4

Basepair signature

cWW-cWW

Number of instances in this motif group

30

Unit IDs

4V9P|1|DA|C|63
4V9P|1|DA|G|64
4V9P|1|DA|A|65
4V9P|1|DA|A|66
*
4V9P|1|DA|U|103
4V9P|1|DA|G|104

Current chains

Chain DA

16S rRNA

Nearby chains

Chain DT

30S ribosomal protein S20