IL_4V9P_343

3D structure

PDB id

4V9P (explore in PDB, NAKB, or RNA 3D Hub)

Description

Control of ribosomal subunit rotation by elongation factor G

Experimental method

X-RAY DIFFRACTION

Resolution

2.9 Å

Loop

Sequence

UUU*GAA

Length

6 nucleotides

Bulged bases

None detected

QA status

Self-complementary:

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4V9P_343 not in the Motif Atlas

Geometric match to IL_4KQ0_003

Geometric discrepancy: 0.2139

The information below is about IL_4KQ0_003

Detailed Annotation

Isolated cWH basepair

Broad Annotation

No text annotation

Motif group

IL_10167.6

Basepair signature

cWW-cHW-cWW

Number of instances in this motif group

51

Unit IDs

4V9P|1|DA|U|1007
4V9P|1|DA|U|1008
4V9P|1|DA|U|1009
*
4V9P|1|DA|G|1020
4V9P|1|DA|A|1021
4V9P|1|DA|A|1022

Current chains

Chain DA

16S rRNA

Nearby chains

Chain DN

30S ribosomal protein S14