IL_4V9P_468

3D structure

PDB id

4V9P (explore in PDB, NAKB, or RNA 3D Hub)

Description

Control of ribosomal subunit rotation by elongation factor G

Experimental method

X-RAY DIFFRACTION

Resolution

2.9 Å

Loop

Sequence

CU*AAG

Length

5 nucleotides

Bulged bases

4V9P|1|EA|A|2800

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4V9P_468 not in the Motif Atlas

Geometric match to IL_7RQB_019

Geometric discrepancy: 0.2404

The information below is about IL_7RQB_019

Detailed Annotation

Single bulged A

Broad Annotation

No text annotation

Motif group

IL_37497.6

Basepair signature

cWW-L-cWW

Number of instances in this motif group

118

Unit IDs

4V9P|1|EA|C|2795
4V9P|1|EA|U|2796
*
4V9P|1|EA|A|2799
4V9P|1|EA|A|2800
4V9P|1|EA|G|2801

Current chains

Chain EA

23S rRNA

Nearby chains

Chain EJ

50S ribosomal protein L13