IL_4V9P_480

3D structure

PDB id

4V9P (explore in PDB, NAKB, or RNA 3D Hub)

Description

Control of ribosomal subunit rotation by elongation factor G

Experimental method

X-RAY DIFFRACTION

Resolution

2.9 Å

Loop

Sequence

AG*CAU

Length

5 nucleotides

Bulged bases

4V9P|1|FA|A|397

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4V9P_480 not in the Motif Atlas

Homologous match to IL_5J7L_002

Geometric discrepancy: 0.1163

The information below is about IL_5J7L_002

Detailed Annotation

Single bulged A

Broad Annotation

No text annotation

Motif group

IL_31462.7

Basepair signature

cWW-L-cWW

Number of instances in this motif group

132

Unit IDs

4V9P|1|FA|A|44
4V9P|1|FA|G|45
*
4V9P|1|FA|C|396
4V9P|1|FA|A|397
4V9P|1|FA|U|398

Current chains

Chain FA

16S rRNA

Nearby chains

Chain FP

30S ribosomal protein S16

Chain FV

elongation factor G