IL_4V9P_528

3D structure

PDB id

4V9P (explore in PDB, NAKB, or RNA 3D Hub)

Description

Control of ribosomal subunit rotation by elongation factor G

Experimental method

X-RAY DIFFRACTION

Resolution

2.9 Å

Loop

Sequence

UUG*CAA

Length

6 nucleotides

Bulged bases

None detected

QA status

Self-complementary: UUG,CAA

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4V9P_528 not in the Motif Atlas

Geometric match to IL_7A0S_026

Geometric discrepancy: 0.3209

The information below is about IL_7A0S_026

Detailed Annotation

Isolated non-canonical cWW pair

Broad Annotation

No text annotation

Motif group

IL_87907.2

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

179

Unit IDs

4V9P|1|FA|U|1122
4V9P|1|FA|U|1123
4V9P|1|FA|G|1124
*
4V9P|1|FA|C|1149
4V9P|1|FA|A|1150
4V9P|1|FA|A|1151

Current chains

Chain FA

16S rRNA

Nearby chains

Chain FI

30S ribosomal protein S9

Chain FJ

30S ribosomal protein S10