IL_4V9P_604

3D structure

PDB id

4V9P (explore in PDB, NAKB, or RNA 3D Hub)

Description

Control of ribosomal subunit rotation by elongation factor G

Experimental method

X-RAY DIFFRACTION

Resolution

2.9 Å

Loop

Sequence

UUAAG*UGAUGA

Length

11 nucleotides

Bulged bases

4V9P|1|GA|U|1523

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4V9P_604 not in the Motif Atlas

Geometric match to IL_4V9F_056

Geometric discrepancy: 0.2815

The information below is about IL_4V9F_056

Detailed Annotation

tSH-tHH-tHS

Broad Annotation

No text annotation

Motif group

IL_62654.1

Basepair signature

cWW-tSH-tHH-tHS-cWW

Number of instances in this motif group

1

Unit IDs

4V9P|1|GA|U|1467
4V9P|1|GA|U|1468
4V9P|1|GA|A|1469
4V9P|1|GA|A|1470
4V9P|1|GA|G|1471
*
4V9P|1|GA|U|1520
4V9P|1|GA|G|1521
4V9P|1|GA|A|1522
4V9P|1|GA|U|1523
4V9P|1|GA|G|1524
4V9P|1|GA|A|1525

Current chains

Chain GA

23S rRNA

Nearby chains