IL_4V9P_700
3D structure
- PDB id
- 4V9P (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Control of ribosomal subunit rotation by elongation factor G
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.9 Å
Loop
- Sequence
- CAAAC*GGUAG
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4V9P_700 not in the Motif Atlas
- Homologous match to IL_4LFB_033
- Geometric discrepancy: 0.0803
- The information below is about IL_4LFB_033
- Detailed Annotation
- tSH-tHW-tHS
- Broad Annotation
- No text annotation
- Motif group
- IL_17136.7
- Basepair signature
- cWW-tSH-tHW-tHS-cWW
- Number of instances in this motif group
- 14
Unit IDs
4V9P|1|HA|C|779
4V9P|1|HA|A|780
4V9P|1|HA|A|781
4V9P|1|HA|A|782
4V9P|1|HA|C|783
*
4V9P|1|HA|G|799
4V9P|1|HA|G|800
4V9P|1|HA|U|801
4V9P|1|HA|A|802
4V9P|1|HA|G|803
Current chains
- Chain HA
- 16S rRNA
Nearby chains
- Chain GA
- Large subunit ribosomal RNA; LSU rRNA
- Chain HK
- 30S ribosomal protein S11
- Chain HU
- 30S ribosomal protein S21
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