IL_4V9P_702

3D structure

PDB id

4V9P (explore in PDB, NAKB, or RNA 3D Hub)

Description

Control of ribosomal subunit rotation by elongation factor G

Experimental method

X-RAY DIFFRACTION

Resolution

2.9 Å

Loop

Sequence

GA*UAC

Length

5 nucleotides

Bulged bases

4V9P|1|HA|A|1394

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4V9P_702 not in the Motif Atlas

Homologous match to IL_4LFB_035

Geometric discrepancy: 0.0958

The information below is about IL_4LFB_035

Detailed Annotation

Single bulged A

Broad Annotation

No text annotation

Motif group

IL_31462.6

Basepair signature

cWW-L-cWW

Number of instances in this motif group

130

Unit IDs

4V9P|1|HA|G|922
4V9P|1|HA|A|923
*
4V9P|1|HA|U|1393
4V9P|1|HA|A|1394
4V9P|1|HA|C|1395

Current chains

Chain HA

16S rRNA

Nearby chains

Chain HE

30S ribosomal protein S5