IL_4V9P_727
3D structure
- PDB id
- 4V9P (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Control of ribosomal subunit rotation by elongation factor G
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.9 Å
Loop
- Sequence
- CAC*GAAG
- Length
- 7 nucleotides
- Bulged bases
- 4V9P|1|HA|A|1492, 4V9P|1|HA|A|1493
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4V9P_727 not in the Motif Atlas
- Geometric match to IL_5VCI_005
- Geometric discrepancy: 0.2591
- The information below is about IL_5VCI_005
- Detailed Annotation
- Not an internal loop
- Broad Annotation
- Not an internal loop
- Motif group
- IL_64417.2
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 18
Unit IDs
4V9P|1|HA|C|1407
4V9P|1|HA|A|1408
4V9P|1|HA|C|1409
*
4V9P|1|HA|G|1491
4V9P|1|HA|A|1492
4V9P|1|HA|A|1493
4V9P|1|HA|G|1494
Current chains
- Chain HA
- 16S rRNA
Nearby chains
- Chain GA
- Large subunit ribosomal RNA; LSU rRNA
- Chain HL
- 30S ribosomal protein S12
- Chain HV
- elongation factor G
Coloring options: