IL_4V9Q_263
3D structure
- PDB id
- 4V9Q (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal Structure of Blasticidin S Bound to Thermus Thermophilus 70S Ribosome.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.4 Å
Loop
- Sequence
- AG*CCU
- Length
- 5 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4V9Q_263 not in the Motif Atlas
- Homologous match to IL_4WF9_089
- Geometric discrepancy: 0.0957
- The information below is about IL_4WF9_089
- Detailed Annotation
- Single stack bend
- Broad Annotation
- No text annotation
- Motif group
- IL_26793.1
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 16
Unit IDs
4V9Q|1|CA|A|2453
4V9Q|1|CA|G|2454
*
4V9Q|1|CA|C|2498
4V9Q|1|CA|C|2499
4V9Q|1|CA|U|2500
Current chains
- Chain CA
- 23S ribosomal RNA
Nearby chains
- Chain CE
- 50S ribosomal protein L3
Coloring options: