IL_4V9R_269

3D structure

PDB id

4V9R (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of antibiotic DITYROMYCIN bound to 70S ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

GCUAGG*CCAAAC

Length

12 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V9R|1|DA|G|875
4V9R|1|DA|C|876
4V9R|1|DA|U|877
4V9R|1|DA|A|878
4V9R|1|DA|G|879
4V9R|1|DA|G|880
*
4V9R|1|DA|C|897
4V9R|1|DA|C|898
4V9R|1|DA|A|899
4V9R|1|DA|A|900
4V9R|1|DA|A|901
4V9R|1|DA|C|902

Current chains

Chain DA

23S Ribosomal RNA

Nearby chains

Chain DQ

50S Ribosomal Protein L16

Chain DZ

50S Ribosomal Protein L25