IL_4V9S_009

3D structure

PDB id

4V9S (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of antibiotic GE82832 bound to 70S ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

3.1 Å

Loop

Sequence

GACAACCC*GGGCUAAUC

Length

17 nucleotides

Bulged bases

4V9S|1|AA|U|173

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V9S|1|AA|G|148
4V9S|1|AA|A|149
4V9S|1|AA|C|150
4V9S|1|AA|A|151
4V9S|1|AA|A|152
4V9S|1|AA|C|153
4V9S|1|AA|C|154
4V9S|1|AA|C|155
*
4V9S|1|AA|G|166
4V9S|1|AA|G|167
4V9S|1|AA|G|168
4V9S|1|AA|C|169
4V9S|1|AA|U|170
4V9S|1|AA|A|171
4V9S|1|AA|A|172
4V9S|1|AA|U|173
4V9S|1|AA|C|174

Current chains

Chain AA

16S Ribosomal RNA

Nearby chains

Chain AT

30S Ribosomal Protein S20