IL_4V9S_078
3D structure
- PDB id
- 4V9S (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of antibiotic GE82832 bound to 70S ribosome
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.1 Å
Loop
- Sequence
- CCG*CUG
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4V9S_078 not in the Motif Atlas
- Homologous match to IL_7RQB_017
- Geometric discrepancy: 0.0526
- The information below is about IL_7RQB_017
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_86319.2
- Basepair signature
- cWW-cWW-cWW
- Number of instances in this motif group
- 270
Unit IDs
4V9S|1|BA|C|719
4V9S|1|BA|C|720
4V9S|1|BA|G|721
*
4V9S|1|BA|C|853
4V9S|1|BA|U|854
4V9S|1|BA|G|855
Current chains
- Chain BA
- 23S Ribosomal RNA
Nearby chains
- Chain BF
- 50S Ribosomal Protein L4
- Chain BP
- 50S Ribosomal Protein L15
Coloring options: