IL_4V9S_155

3D structure

PDB id

4V9S (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of antibiotic GE82832 bound to 70S ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

3.1 Å

Loop

Sequence

CG*CAG

Length

5 nucleotides

Bulged bases

4V9S|1|BA|A|2614

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4V9S_155 not in the Motif Atlas

Homologous match to IL_7RQB_101

Geometric discrepancy: 0.2195

The information below is about IL_7RQB_101

Detailed Annotation

Single bulged A

Broad Annotation

No text annotation

Motif group

IL_37497.6

Basepair signature

cWW-L-cWW

Number of instances in this motif group

118

Unit IDs

4V9S|1|BA|C|2603
4V9S|1|BA|G|2604
*
4V9S|1|BA|C|2613
4V9S|1|BA|A|2614
4V9S|1|BA|G|2615

Current chains

Chain BA

23S Ribosomal RNA

Nearby chains

Chain AX

Transfer RNA; tRNA

Chain B0

50S Ribosomal Protein L27

Chain BD

50S Ribosomal Protein L2