IL_4V9S_347

3D structure

PDB id

4V9S (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of antibiotic GE82832 bound to 70S ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

3.1 Å

Loop

Sequence

GCUAGGG*UACCAAAC

Length

15 nucleotides

Bulged bases

4V9S|1|BA|A|942

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V9S|1|BA|G|922
4V9S|1|BA|C|923
4V9S|1|BA|U|924
4V9S|1|BA|A|925
4V9S|1|BA|G|926
4V9S|1|BA|G|927
4V9S|1|BA|G|928
*
4V9S|1|BA|U|941
4V9S|1|BA|A|942
4V9S|1|BA|C|943
4V9S|1|BA|C|944
4V9S|1|BA|A|945
4V9S|1|BA|A|946
4V9S|1|BA|A|947
4V9S|1|BA|C|948

Current chains

Chain BA

23S Ribosomal RNA

Nearby chains

Chain BQ

50S Ribosomal Protein L16

Chain BZ

50S Ribosomal Protein L25