IL_4V9S_354

3D structure

PDB id

4V9S (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of antibiotic GE82832 bound to 70S ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

3.1 Å

Loop

Sequence

GCUAGGG*UACCAAAC

Length

15 nucleotides

Bulged bases

4V9S|1|DA|A|896

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V9S|1|DA|G|875
4V9S|1|DA|C|876
4V9S|1|DA|U|877
4V9S|1|DA|A|878
4V9S|1|DA|G|879
4V9S|1|DA|G|880
4V9S|1|DA|G|881
*
4V9S|1|DA|U|895
4V9S|1|DA|A|896
4V9S|1|DA|C|897
4V9S|1|DA|C|898
4V9S|1|DA|A|899
4V9S|1|DA|A|900
4V9S|1|DA|A|901
4V9S|1|DA|C|902

Current chains

Chain DA

23S Ribosomal RNA

Nearby chains

Chain DQ

50S Ribosomal Protein L16

Chain DZ

50S Ribosomal Protein L25