IL_4W23_046
3D structure
- PDB id
- 4W23 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the 80S mammalian ribosome bound to eEF2 (this entry contains the small ribosomal subunit)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.5 Å
Loop
- Sequence
- AUUC*GGACCAGAGCGAAAGCAUUU
- Length
- 24 nucleotides
- Bulged bases
- 4W23|1|2|G|991
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_58965.1
- Basepair signature
- cWW-cWW-cWW-R-cWW-L-L-L-L-L-cWW-bif-R-tSH-R-R
- Number of instances in this motif group
- 1
Unit IDs
4W23|1|2|A|938
4W23|1|2|U|939
4W23|1|2|U|940
4W23|1|2|C|941
*
4W23|1|2|G|985
4W23|1|2|G|986
4W23|1|2|A|987
4W23|1|2|C|988
4W23|1|2|C|989
4W23|1|2|A|990
4W23|1|2|G|991
4W23|1|2|A|992
4W23|1|2|G|993
4W23|1|2|C|994
4W23|1|2|G|995
4W23|1|2|A|996
4W23|1|2|A|997
4W23|1|2|A|998
4W23|1|2|G|999
4W23|1|2|C|1000
4W23|1|2|A|1001
4W23|1|2|U|1002
4W23|1|2|U|1003
4W23|1|2|U|1004
Current chains
- Chain 2
- 18S ribosomal RNA
Nearby chains
- Chain B
- Ribosomal protein eS1
- Chain N
- Ribosomal protein uS15
- Chain O
- Ribosomal protein uS11
- Chain a
- Ribosomal protein eS26
Coloring options: