IL_4W2E_045

3D structure

PDB id

4W2E (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of Elongation Factor 4 (EF4/LepA) bound to the Thermus thermophilus 70S ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

2.9 Å

Loop

Sequence

GAGUG*CUC

Length

8 nucleotides

Bulged bases

4W2E|1|A|A|1088

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4W2E_045 not in the Motif Atlas

Homologous match to IL_7RQB_044

Geometric discrepancy: 0.2235

The information below is about IL_7RQB_044

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4W2E|1|A|G|1087
4W2E|1|A|A|1088
4W2E|1|A|G|1089
4W2E|1|A|U|1090
4W2E|1|A|G|1091
*
4W2E|1|A|C|1100
4W2E|1|A|U|1101
4W2E|1|A|C|1102

Current chains

Chain A

23S Ribosomal RNA

Nearby chains

Chain 9

50S ribosomal protein L36

Chain K

50S ribosomal protein L11

Chain Q

50S ribosomal protein L16