IL_4W2E_056

3D structure

PDB id

4W2E (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of Elongation Factor 4 (EF4/LepA) bound to the Thermus thermophilus 70S ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

2.9 Å

Loop

Sequence

CGAUG*CUAAG

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4W2E_056 not in the Motif Atlas

Geometric match to IL_4WF9_051

Geometric discrepancy: 0.2563

The information below is about IL_4WF9_051

Detailed Annotation

UAA/GAN

Broad Annotation

UAA/GAN

Motif group

IL_89021.3

Basepair signature

cWW-L-R-L-R-tHS-cWW

Number of instances in this motif group

7

Unit IDs

4W2E|1|A|C|1417
4W2E|1|A|G|1418
4W2E|1|A|A|1419
4W2E|1|A|U|1420
4W2E|1|A|G|1421
*
4W2E|1|A|C|1577
4W2E|1|A|U|1578
4W2E|1|A|A|1579
4W2E|1|A|A|1580
4W2E|1|A|G|1581

Current chains

Chain A

23S Ribosomal RNA

Nearby chains