IL_4W2E_168

3D structure

PDB id

4W2E (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of Elongation Factor 4 (EF4/LepA) bound to the Thermus thermophilus 70S ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

2.9 Å

Loop

Sequence

GUUGC*GGCACUC

Length

12 nucleotides

Bulged bases

4W2E|1|a|U|1125

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4W2E_168 not in the Motif Atlas

Homologous match to IL_4LFB_048

Geometric discrepancy: 0.2671

The information below is about IL_4LFB_048

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_89862.1

Basepair signature

cWW-L-tHS-L-R-L-cWW-L

Number of instances in this motif group

5

Unit IDs

4W2E|1|a|G|1124
4W2E|1|a|U|1125
4W2E|1|a|U|1126
4W2E|1|a|G|1127
4W2E|1|a|C|1128
*
4W2E|1|a|G|1143
4W2E|1|a|G|1144
4W2E|1|a|C|1145
4W2E|1|a|A|1146
4W2E|1|a|C|1147
4W2E|1|a|U|1148
4W2E|1|a|C|1149

Current chains

Chain a

16S Ribosomal RNA

Nearby chains

Chain i

30S ribosomal protein S9

Chain j

30S ribosomal protein S10