IL_4W2F_160
3D structure
- PDB id
- 4W2F (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the Thermus thermophilus 70S ribosome in complex with amicoumacin, mRNA and three deacylated tRNAs in the A, P and E sites
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.4 Å
Loop
- Sequence
- CUC*GCGAG
- Length
- 8 nucleotides
- Bulged bases
- 4W2F|1|BA|G|2588, 4W2F|1|BA|A|2589
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4W2F_160 not in the Motif Atlas
- Geometric match to IL_7RQB_097
- Geometric discrepancy: 0.0411
- The information below is about IL_7RQB_097
- Detailed Annotation
- Isolated non-canonical cWW with bulges
- Broad Annotation
- Isolated non-canonical cWW with bulges
- Motif group
- IL_90933.2
- Basepair signature
- cWW-cWW-cWW
- Number of instances in this motif group
- 11
Unit IDs
4W2F|1|BA|C|2522
4W2F|1|BA|U|2523
4W2F|1|BA|C|2524
*
4W2F|1|BA|G|2586
4W2F|1|BA|C|2587
4W2F|1|BA|G|2588
4W2F|1|BA|A|2589
4W2F|1|BA|G|2590
Current chains
- Chain BA
- 23S Ribosomal RNA
Nearby chains
- Chain B5
- 50S Ribosomal Protein L32
- Chain BE
- 50S Ribosomal Protein L3
Coloring options: