IL_4W2F_365

3D structure

PDB id

4W2F (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Thermus thermophilus 70S ribosome in complex with amicoumacin, mRNA and three deacylated tRNAs in the A, P and E sites

Experimental method

X-RAY DIFFRACTION

Resolution

2.4 Å

Loop

Sequence

CGAUGAAGG*CUGGAG

Length

15 nucleotides

Bulged bases

4W2F|1|DA|U|1211

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4W2F|1|DA|C|1208
4W2F|1|DA|G|1209
4W2F|1|DA|A|1210
4W2F|1|DA|U|1211
4W2F|1|DA|G|1212
4W2F|1|DA|A|1213
4W2F|1|DA|A|1214
4W2F|1|DA|G|1215
4W2F|1|DA|G|1216
*
4W2F|1|DA|C|1233
4W2F|1|DA|U|1234
4W2F|1|DA|G|1235
4W2F|1|DA|G|1236
4W2F|1|DA|A|1237
4W2F|1|DA|G|1238

Current chains

Chain DA

23S Ribosomal RNA

Nearby chains

Chain DU

50S Ribosomal Protein L20