IL_4W2G_092
3D structure
- PDB id
- 4W2G (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the Thermus thermophilus 70S ribosome in complex with pactamycin (soaked), mRNA and three deacylated tRNAs in the A, P and E sites
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.55 Å
Loop
- Sequence
- AUA*UGU
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4W2G_092 not in the Motif Atlas
- Homologous match to IL_4WF9_034
- Geometric discrepancy: 0.1407
- The information below is about IL_4WF9_034
- Detailed Annotation
- Isolated cWS basepair
- Broad Annotation
- No text annotation
- Motif group
- IL_52767.5
- Basepair signature
- cWW-L-R-cWW
- Number of instances in this motif group
- 28
Unit IDs
4W2G|1|BA|A|917
4W2G|1|BA|U|918
4W2G|1|BA|A|919
*
4W2G|1|BA|U|951
4W2G|1|BA|G|952
4W2G|1|BA|U|953
Current chains
- Chain BA
- 23S Ribosomal RNA
Nearby chains
- Chain BQ
- 50S Ribosomal Protein L16
- Chain BZ
- 50S Ribosomal Protein L25
Coloring options: