IL_4W2G_268

3D structure

PDB id

4W2G (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Thermus thermophilus 70S ribosome in complex with pactamycin (soaked), mRNA and three deacylated tRNAs in the A, P and E sites

Experimental method

X-RAY DIFFRACTION

Resolution

2.55 Å

Loop

Sequence

GCUAGG*CCAAAC

Length

12 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4W2G|1|DA|G|875
4W2G|1|DA|C|876
4W2G|1|DA|U|877
4W2G|1|DA|A|878
4W2G|1|DA|G|879
4W2G|1|DA|G|880
*
4W2G|1|DA|C|897
4W2G|1|DA|C|898
4W2G|1|DA|A|899
4W2G|1|DA|A|900
4W2G|1|DA|A|901
4W2G|1|DA|C|902

Current chains

Chain DA

23S Ribosomal RNA

Nearby chains

Chain CW

Transfer RNA; tRNA

Chain DQ

50S Ribosomal Protein L16

Chain DZ

50S Ribosomal Protein L25