IL_4W2G_279
3D structure
- PDB id
- 4W2G (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the Thermus thermophilus 70S ribosome in complex with pactamycin (soaked), mRNA and three deacylated tRNAs in the A, P and E sites
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.55 Å
Loop
- Sequence
- CGC*GCG
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Self-complementary: CGC,GCG
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4W2G_279 not in the Motif Atlas
- Homologous match to IL_4WF9_042
- Geometric discrepancy: 0.234
- The information below is about IL_4WF9_042
- Detailed Annotation
- Isolated non-canonical cWW pair
- Broad Annotation
- No text annotation
- Motif group
- IL_87907.2
- Basepair signature
- cWW-cWW-cWW
- Number of instances in this motif group
- 179
Unit IDs
4W2G|1|DA|C|1038
4W2G|1|DA|G|1039
4W2G|1|DA|C|1040
*
4W2G|1|DA|G|1115
4W2G|1|DA|C|1116
4W2G|1|DA|G|1117
Current chains
- Chain DA
- 23S Ribosomal RNA
Nearby chains
- Chain DQ
- 50S Ribosomal Protein L16
- Chain DZ
- 50S Ribosomal Protein L25
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