3D structure

PDB id
4W2G (explore in PDB, NAKB, or RNA 3D Hub)
Description
Crystal structure of the Thermus thermophilus 70S ribosome in complex with pactamycin (soaked), mRNA and three deacylated tRNAs in the A, P and E sites
Experimental method
X-RAY DIFFRACTION
Resolution
2.55 Å

Loop

Sequence
AUCU*AGGUUU
Length
10 nucleotides
Bulged bases
4W2G|1|DA|U|2491
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

4W2G|1|DA|A|2459
4W2G|1|DA|U|2460
4W2G|1|DA|C|2461
4W2G|1|DA|U|2462
*
4W2G|1|DA|A|2488
4W2G|1|DA|G|2489
4W2G|1|DA|G|2490
4W2G|1|DA|U|2491
4W2G|1|DA|U|2492
4W2G|1|DA|U|2493

Current chains

Chain DA
23S Ribosomal RNA

Nearby chains

Chain CW
Transfer RNA; tRNA
Chain D0
50S Ribosomal Protein L27
Chain DB
5S ribosomal RNA; 5S rRNA
Chain DQ
50S Ribosomal Protein L16

Coloring options:

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