IL_4W2H_095
3D structure
- PDB id
- 4W2H (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the Thermus thermophilus 70S ribosome in complex with pactamycin (co-crystallized), mRNA and deacylated tRNA in the P site
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.7 Å
Loop
- Sequence
- GGGGG*CCUACC
- Length
- 11 nucleotides
- Bulged bases
- 4W2H|1|BA|A|942
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4W2H_095 not in the Motif Atlas
- Homologous match to IL_5J7L_274
- Geometric discrepancy: 0.4879
- The information below is about IL_5J7L_274
- Detailed Annotation
- Double sheared with non-canonical cWW
- Broad Annotation
- Double sheared
- Motif group
- IL_17948.2
- Basepair signature
- cWW-L-R-tSH-tHS-cWW
- Number of instances in this motif group
- 13
Unit IDs
4W2H|1|BA|G|926
4W2H|1|BA|G|927
4W2H|1|BA|G|928
4W2H|1|BA|G|929
4W2H|1|BA|G|930
*
4W2H|1|BA|C|939
4W2H|1|BA|C|940
4W2H|1|BA|U|941
4W2H|1|BA|A|942
4W2H|1|BA|C|943
4W2H|1|BA|C|944
Current chains
- Chain BA
- 23S Ribosomal RNA
Nearby chains
- Chain BQ
- 50S Ribosomal Protein L16
- Chain BZ
- 50S Ribosomal Protein L25
Coloring options: