IL_4W2H_218
3D structure
- PDB id
- 4W2H (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the Thermus thermophilus 70S ribosome in complex with pactamycin (co-crystallized), mRNA and deacylated tRNA in the P site
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.7 Å
Loop
- Sequence
- GUC*GUC
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4W2H_218 not in the Motif Atlas
- Homologous match to IL_4LFB_047
- Geometric discrepancy: 0.1411
- The information below is about IL_4LFB_047
- Detailed Annotation
- Isolated non-canonical cWW pair
- Broad Annotation
- No text annotation
- Motif group
- IL_68118.3
- Basepair signature
- cWW-cWW-cWW
- Number of instances in this motif group
- 29
Unit IDs
4W2H|1|CA|G|1061
4W2H|1|CA|U|1062
4W2H|1|CA|C|1063
*
4W2H|1|CA|G|1193
4W2H|1|CA|U|1194
4W2H|1|CA|C|1195
Current chains
- Chain CA
- 16S Ribosomal RNA
Nearby chains
- Chain CC
- 30S Ribosomal Protein S3
- Chain CE
- 30S Ribosomal Protein S5
- Chain CI
- 30S Ribosomal Protein S9
- Chain CJ
- 30S Ribosomal Protein S10
- Chain CN
- 30S Ribosomal Protein S14
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