IL_4W2H_267

3D structure

PDB id

4W2H (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Thermus thermophilus 70S ribosome in complex with pactamycin (co-crystallized), mRNA and deacylated tRNA in the P site

Experimental method

X-RAY DIFFRACTION

Resolution

2.7 Å

Loop

Sequence

GCUAGGGG*CUACCAAAC

Length

17 nucleotides

Bulged bases

4W2H|1|DA|A|896

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4W2H|1|DA|G|875
4W2H|1|DA|C|876
4W2H|1|DA|U|877
4W2H|1|DA|A|878
4W2H|1|DA|G|879
4W2H|1|DA|G|880
4W2H|1|DA|G|881
4W2H|1|DA|G|882
*
4W2H|1|DA|C|894
4W2H|1|DA|U|895
4W2H|1|DA|A|896
4W2H|1|DA|C|897
4W2H|1|DA|C|898
4W2H|1|DA|A|899
4W2H|1|DA|A|900
4W2H|1|DA|A|901
4W2H|1|DA|C|902

Current chains

Chain DA

23S Ribosomal RNA

Nearby chains

Chain DQ

50S Ribosomal Protein L16

Chain DZ

50S Ribosomal Protein L25